1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
|
class PhenotypeColors:
"""# Phenotype Colorings
Standardization for the different phenotype colors"""
def __init__(self):
"""# Empty Construtor"""
pass
def get_basic_colors(self, transition=False):
"""# Return the Color Names
- transition: Returns the color for the transition class too"""
if transition:
return ["yellow", "purple", "green", "blue", "cyan"]
return ["yellow", "purple", "green", "blue"]
def get_colors(self, transition=False):
"""# Return the Color Names
- transition: Returns the color for the transition class too"""
if transition:
return ["#ffff00", "#ff3cfa", "#11f309", "#213ff0", "cyan"]
return ["#ffff00", "#ff3cfa", "#11fe09", "#213ff0"]
def get_colormap(self, transition=False):
"""# Return the Matplotlib Colormap
- transition: Returns the color for the transition class too"""
from matplotlib.colors import ListedColormap as LC
return LC(self.get_colors(transition))
# Basic Exports
Pcolor = PhenotypeColors().get_colors()
Pmap = PhenotypeColors().get_colormap()
Pmapx = PhenotypeColors().get_colormap(True)
|
